MultiQC
A powerful tool for Visualization
VisualizationFree
MultiQC
Aggregate results from bioinformatics analyses across many samples into a single report.
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Overview
MultiQC searches a given directory for analysis logs and compiles a HTML report. It's a general use tool, perfect for summarizing the output from numerous bioinformatics tools.
Supported Tools
It supports 100+ bioinformatics tools including FastQC, STAR, Kallisto, Salmon, GATK, Picard, and many more.
Interactive Plots
The reports generated are interactive, allowing you to highlight specific samples, rename them, or hide outliers. It is indispensable for the Quality Control step of any pipeline.
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Tool Details
Updated1/29/2026
LicenseOpen Source (MIT)
RatingNo reviews